Getting Started

Let's get started on some code!

To its core, Toolchest is flexible. We integrate with your existing pipelines, no matter the language or framework.

To get started, choose the language that suits your environment, and we'll see Toolchest in action.

What’s Next

If you use Python in Jupyter notebooks, Snakemake, Nextflow using Python, or any other Python code, choose "Getting Started in Python".

If you use R in R Studio, an R script, or any other R code, choose "Getting Started in R".

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